Variant report

Variant	rs73748522
Chromosome Location	chr6:70101267-70101268
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs16900665	1.00[AMR][1000 genomes]
rs73748511	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432919	chr6:69873179-70221322	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:70081000-70108000	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr6:70095800-70102200	Weak transcription	Brain Germinal Matrix	brain
3	chr6:70096000-70101600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr6:70097200-70109000	Weak transcription	Fetal Brain Male	brain
5	chr6:70099200-70106000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr6:70099200-70108000	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr6:70099400-70108000	Weak transcription	Brain Anterior Caudate	brain
8	chr6:70100000-70103000	Weak transcription	Primary T cells from cord blood	blood
9	chr6:70100200-70101800	Weak transcription	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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