The 2.0 version of rSNPBase

Variant report

Variant rs73755224
Chromosome Location chr5:53996934-53996935
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:53987400-53999600 Weak transcription Pancreas Pancrea
2 chr5:53987600-53997800 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr5:53990000-53999000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr5:53990600-53999000 Weak transcription Right Ventricle heart
5 chr5:53990800-53998800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr5:53992600-53998400 Weak transcription Brain Hippocampus Middle brain
7 chr5:53992800-53997000 Weak transcription Adipose Nuclei Adipose
8 chr5:53992800-53997800 Enhancers HSMMtube muscle
9 chr5:53993000-53997000 Weak transcription Ovary ovary
10 chr5:53993000-53997600 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr5:53993000-53998400 Weak transcription Brain Substantia Nigra brain
12 chr5:53993000-53999000 Weak transcription Placenta Placenta
13 chr5:53993200-53997200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr5:53993200-53998200 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr5:53993200-53998400 Weak transcription Brain Cingulate Gyrus brain
16 chr5:53993200-53998600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr5:53993400-53998200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr5:53993400-53998600 Weak transcription Fetal Muscle Leg muscle
19 chr5:53993800-53998200 Weak transcription Colon Smooth Muscle Colon
20 chr5:53994000-53997800 Weak transcription Stomach Smooth Muscle stomach
21 chr5:53994000-53998800 Weak transcription Rectal Smooth Muscle rectum
22 chr5:53994000-53999000 Weak transcription Fetal Brain Male brain
23 chr5:53994200-53998800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr5:53994400-53997800 Enhancers HSMM muscle
25 chr5:53994600-53999000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr5:53994800-53997400 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr5:53995000-53997000 Weak transcription Fetal Stomach stomach
28 chr5:53995000-53998400 Enhancers NH-A brain
29 chr5:53995200-53997200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr5:53995200-53998200 Weak transcription Fetal Lung lung
31 chr5:53995800-53999800 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr5:53996000-53997600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr5:53996000-53997800 Weak transcription Aorta Aorta
34 chr5:53996000-53999000 Weak transcription Left Ventricle heart
35 chr5:53996000-53999600 Enhancers HMEC breast
36 chr5:53996200-54000000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr5:53996400-53997200 Weak transcription Spleen Spleen
38 chr5:53996400-53999400 Enhancers Muscle Satellite Cultured Cells --
39 chr5:53996600-53997800 Enhancers NHEK skin
40 chr5:53996600-53998400 Enhancers NHDF-Ad bronchial
41 chr5:53996600-53999200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr5:53996600-53999400 Enhancers NHLF lung
43 chr5:53996600-53999800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr5:53996600-53999800 Enhancers Osteobl bone
45 chr5:53996800-53997200 Enhancers A549 lung
46 chr5:53996800-53997600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr5:53996800-53997600 Enhancers Hela-S3 cervix
48 chr5:53996800-53998600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr5:53996800-53999600 Enhancers Primary monocytes fromperipheralblood blood
50 chr5:53996800-53999600 Enhancers Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015