Variant report

Variant	rs73761083
Chromosome Location	chr6:75644242-75644243
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:75639046..75641423-chr6:75642242..75645228,2	MCF-7	breast:
2	chr6:75637854..75641239-chr6:75643350..75645986,3	MCF-7	breast:
3	chr6:75558269..75560458-chr6:75641599..75644531,2	K562	blood:

Variant related genes	Relation type
ENSG00000219736	Chromatin interaction

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs56087030	0.86[AFR][1000 genomes]
rs6929809	0.86[AFR][1000 genomes]
rs6930530	0.94[AFR][1000 genomes]
rs73745902	0.86[AFR][1000 genomes]
rs73747803	0.86[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv520746	chr6:75211546-75691814	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv830696	chr6:75538316-75734609	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:75642600-75646000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr6:75642600-75646000	Weak transcription	NHDF-Ad	bronchial
3	chr6:75642600-75646200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr6:75642600-75646400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr6:75642600-75646400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr6:75642600-75646400	Weak transcription	NH-A	brain
7	chr6:75642600-75646600	Weak transcription	NHEK	skin
8	chr6:75642600-75647000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr6:75642600-75647200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr6:75642800-75646000	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr6:75642800-75646000	Weak transcription	HSMM	muscle
12	chr6:75642800-75646400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr6:75643000-75646000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr6:75643000-75646400	Weak transcription	HMEC	breast
15	chr6:75643000-75656800	Weak transcription	HSMMtube	muscle
16	chr6:75643200-75646400	Weak transcription	NHLF	lung
17	chr6:75643600-75646400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr6:75643800-75646000	Weak transcription	Osteobl	bone
19	chr6:75643800-75646400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr6:75643800-75656800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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