Variant report

Variant	rs73763408
Chromosome Location	chr6:79238978-79238979
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs56048923	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57134231	1.00[AFR][1000 genomes]
rs58278525	1.00[AMR][1000 genomes]
rs58525488	1.00[AMR][1000 genomes]
rs59037166	1.00[AMR][1000 genomes]
rs60885154	1.00[AFR][1000 genomes]
rs73762743	1.00[AMR][1000 genomes]
rs73762968	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73762969	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73762974	1.00[AFR][1000 genomes]
rs73763406	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73763419	1.00[AFR][1000 genomes]
rs73763420	0.81[AFR][1000 genomes]
rs73763424	1.00[AFR][1000 genomes]
rs73765046	1.00[AMR][1000 genomes]
rs73765049	1.00[AMR][1000 genomes]
rs73765052	1.00[AMR][1000 genomes]
rs73765055	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886235	chr6:78861808-79369972	Enhancers Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv604011	chr6:79042990-79455282	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv886300	chr6:79129963-79341891	Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv522646	chr6:79185106-79333988	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv1028767	chr6:79200713-79341224	Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:79238000-79239000	Enhancers	Fetal Brain Male	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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