Variant report

Variant	rs73765664
Chromosome Location	chr5:74354220-74354221
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs73765655	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018865	chr5:74246293-74494552	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	esv1835096	chr5:74336883-74356857	Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:74350200-74357200	Enhancers	Primary hematopoietic stem cells short term culture	blood
2	chr5:74350400-74355000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
3	chr5:74350400-74355800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr5:74350400-74360000	Enhancers	Fetal Thymus	thymus
5	chr5:74350600-74356400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr5:74350600-74357400	Enhancers	Primary T cells fromperipheralblood	blood
7	chr5:74350800-74357200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
8	chr5:74350800-74357400	Enhancers	Primary T helper cells fromperipheralblood	blood
9	chr5:74350800-74359600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
10	chr5:74350800-74367600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr5:74351000-74355000	Enhancers	Primary T killer memory cells from peripheral blood	blood
12	chr5:74351000-74357000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
13	chr5:74351200-74354800	Enhancers	Primary T helper cells PMA-I stimulated	--
14	chr5:74351600-74355600	Weak transcription	Pancreas	Pancrea
15	chr5:74352000-74356000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
16	chr5:74352600-74357000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr5:74352600-74357200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr5:74352800-74355000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr5:74353600-74354400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr5:74353800-74354800	Enhancers	Primary T cells from cord blood	blood
21	chr5:74353800-74355000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
22	chr5:74353800-74355200	Enhancers	Primary T helper naive cells from peripheral blood	blood
23	chr5:74353800-74355200	Enhancers	Thymus	Thymus
24	chr5:74354000-74354400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
25	chr5:74354000-74355200	Weak transcription	Placenta Amnion	Placenta Amnion
26	chr5:74354000-74355400	Weak transcription	Primary hematopoietic stem cells	blood
27	chr5:74354200-74354400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood

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