Variant report

Variant	rs73769059
Chromosome Location	chr6:114432068-114432069
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs58642146	1.00[AMR][1000 genomes]
rs73767009	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024062	chr6:114311029-114679557	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	59 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:114422200-114438800	Weak transcription	HSMM	muscle
2	chr6:114424000-114436600	Weak transcription	HSMMtube	muscle
3	chr6:114425600-114443000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr6:114426000-114443200	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr6:114430200-114443400	Weak transcription	HepG2	liver
6	chr6:114430800-114477800	Weak transcription	Brain Anterior Caudate	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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