Variant report

Variant	rs73774160
Chromosome Location	chr6:134246052-134246053
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs55896993	0.87[AFR][1000 genomes]
rs60523271	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73774162	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34122	chr6:134089019-134378252	Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:134236600-134252800	Weak transcription	Right Atrium	heart
2	chr6:134240000-134246400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr6:134242600-134248400	Weak transcription	Ovary	ovary
4	chr6:134245400-134246400	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr6:134245600-134246400	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr6:134245800-134246400	Enhancers	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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