Variant report

Variant	rs73781443
Chromosome Location	chr6:132523837-132523838
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs11969161	1.00[AMR][1000 genomes]
rs13437392	0.81[AMR][1000 genomes]
rs56074052	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57395154	1.00[AMR][1000 genomes]
rs59580936	0.90[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762616	chr6:132404708-132584324	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132519600-132530600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr6:132522600-132525000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr6:132522800-132524000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr6:132523000-132524600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:132523000-132524600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr6:132523000-132524600	Enhancers	Duodenum Smooth Muscle	Duodenum
7	chr6:132523000-132524600	Enhancers	NHDF-Ad	bronchial
8	chr6:132523000-132524800	Enhancers	Fetal Muscle Leg	muscle
9	chr6:132523200-132524000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr6:132523200-132524400	Enhancers	Adipose Nuclei	Adipose
11	chr6:132523200-132524400	Enhancers	HSMM	muscle
12	chr6:132523200-132524400	Enhancers	Osteobl	bone
13	chr6:132523200-132524600	Enhancers	Muscle Satellite Cultured Cells	--
14	chr6:132523400-132524400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr6:132523400-132524600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr6:132523600-132524000	Enhancers	Stomach Smooth Muscle	stomach
17	chr6:132523600-132524400	Enhancers	NHLF	lung
18	chr6:132523600-132524800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr6:132523800-132524000	Enhancers	Aorta	Aorta
20	chr6:132523800-132524200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr6:132523800-132524200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr6:132523800-132524600	Enhancers	Fetal Stomach	stomach
23	chr6:132523800-132524600	Enhancers	HSMMtube	muscle

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