Variant report

Variant	rs73782108
Chromosome Location	chr5:113325205-113325206
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs17136150	1.00[AMR][1000 genomes]
rs17136152	1.00[AMR][1000 genomes]
rs73779590	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73779594	1.00[AMR][1000 genomes]
rs73782105	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7708011	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv471042	chr5:113160490-113440892	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv2762537	chr5:113324270-113335389	Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases
3	esv2763922	chr5:113324270-113335389	Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:113325200-113325600	Active TSS	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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