Variant report

Variant	rs73795091
Chromosome Location	chr5:147718924-147718925
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs73795077	1.00[EUR][1000 genomes]
rs73795080	1.00[EUR][1000 genomes]
rs73795081	1.00[EUR][1000 genomes]
rs73795083	1.00[EUR][1000 genomes]
rs73795086	1.00[EUR][1000 genomes]
rs73795087	1.00[EUR][1000 genomes]
rs73795092	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv883015	chr5:147404281-147751035	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
2	nsv599945	chr5:147649181-147720487	Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers Active TSS Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:147709400-147749200	Weak transcription	Psoas Muscle	Psoas
2	chr5:147713000-147728800	Weak transcription	Aorta	Aorta
3	chr5:147713400-147721800	Weak transcription	Liver	Liver
4	chr5:147714800-147731200	Weak transcription	Pancreas	Pancrea
5	chr5:147715000-147720800	Weak transcription	Left Ventricle	heart
6	chr5:147716800-147722800	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr5:147717000-147720800	Weak transcription	Esophagus	oesophagus
8	chr5:147717000-147721600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr5:147717000-147721800	Weak transcription	HMEC	breast
10	chr5:147717000-147722200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr5:147717000-147722200	Weak transcription	NHEK	skin
12	chr5:147718400-147723000	Weak transcription	Colon Smooth Muscle	Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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