Variant report

Variant	rs73803230
Chromosome Location	chr4:20138875-20138876
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12499743	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73801396	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73801397	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73801398	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73803209	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73803210	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73803213	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73803218	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs73803219	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529290	chr4:19658583-20173839	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv593790	chr4:19740879-20142039	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:20138400-20139400	Enhancers	NHDF-Ad	bronchial
2	chr4:20138600-20139400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr4:20138800-20139200	Enhancers	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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