Variant report

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs73812510	0.90[AFR][1000 genomes]
rs73812520	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998450	chr4:30823631-31628179	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv1007884	chr4:31071934-31680623	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	nsv1007145	chr4:31079681-31670541	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:31066400-31088600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr4:31070600-31088400	Weak transcription	Fetal Stomach	stomach
3	chr4:31077800-31088600	Weak transcription	Aorta	Aorta
4	chr4:31083400-31088200	Weak transcription	NH-A	brain
5	chr4:31084000-31090000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr4:31085200-31092600	Enhancers	Fetal Heart	heart
7	chr4:31086800-31088800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr4:31087000-31088000	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr4:31087000-31096000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr4:31087200-31088800	Enhancers	Fetal Lung	lung
11	chr4:31087400-31088000	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr4:31087400-31088800	Enhancers	Colon Smooth Muscle	Colon
13	chr4:31087400-31089200	Enhancers	Fetal Brain Male	brain
14	chr4:31087600-31088000	Flanking Active TSS	HUVEC	blood vessel
15	chr4:31087600-31088600	Weak transcription	HUES6 Cell Line	embryonic stem cell
16	chr4:31087600-31088600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr4:31087600-31089000	Enhancers	Pancreatic Islets	Pancreatic Islet
18	chr4:31087600-31090200	Weak transcription	Muscle Satellite Cultured Cells	--
19	chr4:31087800-31089000	Enhancers	Stomach Smooth Muscle	stomach
20	chr4:31087800-31089800	Weak transcription	NHLF	lung
21	chr4:31087800-31091400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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