The 2.0 version of rSNPBase

Variant report

Variant rs73816161
Chromosome Location chr4:54213700-54213701
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:54169800-54216200 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr4:54170600-54230600 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr4:54172600-54215400 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr4:54188200-54213800 Weak transcription Right Ventricle heart
5 chr4:54188200-54218200 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr4:54188200-54231200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr4:54188600-54215400 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr4:54190000-54213800 Weak transcription HUVEC blood vessel
9 chr4:54201200-54220000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr4:54201400-54215600 Weak transcription Primary T cells fromperipheralblood blood
11 chr4:54201800-54215800 Weak transcription Primary B cells from peripheral blood blood
12 chr4:54202200-54226000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr4:54204200-54213800 Weak transcription Gastric stomach
14 chr4:54206600-54220200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr4:54209200-54215400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr4:54210400-54225600 Weak transcription Small Intestine intestine
17 chr4:54211200-54216000 Weak transcription Thymus Thymus
18 chr4:54211400-54219200 Weak transcription Fetal Intestine Small intestine
19 chr4:54211600-54213800 Weak transcription Left Ventricle heart
20 chr4:54211600-54219600 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr4:54211600-54220200 Weak transcription Fetal Stomach stomach
22 chr4:54211800-54213800 Weak transcription Fetal Muscle Leg muscle
23 chr4:54211800-54217800 Weak transcription Primary hematopoietic stem cells blood
24 chr4:54212000-54213800 Weak transcription Duodenum Mucosa Duodenum
25 chr4:54212000-54220600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr4:54212000-54227200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr4:54212200-54213800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr4:54212200-54215400 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr4:54212200-54220800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr4:54212400-54217800 Weak transcription Stomach Smooth Muscle stomach
31 chr4:54212600-54214200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr4:54212600-54214200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
33 chr4:54212600-54214200 Enhancers Fetal Lung lung
34 chr4:54212600-54219200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr4:54212800-54214000 Enhancers HSMM muscle
36 chr4:54212800-54214200 Strong transcription Primary B cells from cord blood blood
37 chr4:54212800-54214200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr4:54212800-54214200 Enhancers Osteobl bone
39 chr4:54212800-54214400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr4:54212800-54214400 Strong transcription Primary T helper cells fromperipheralblood blood
41 chr4:54212800-54214400 Strong transcription Dnd41 blood
42 chr4:54212800-54219600 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr4:54213000-54213800 Weak transcription Fetal Brain Male brain
44 chr4:54213000-54214200 Enhancers Fetal Heart heart
45 chr4:54213000-54214600 Strong transcription Primary T cells from cord blood blood
46 chr4:54213200-54213800 Strong transcription Fetal Muscle Trunk muscle
47 chr4:54213200-54213800 Enhancers NHLF lung
48 chr4:54213200-54214000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr4:54213200-54214200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
50 chr4:54213200-54214200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015