Variant report

Variant	rs73848830
Chromosome Location	chr3:79136494-79136495
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs61120197	1.00[AMR][1000 genomes]
rs72898004	1.00[AMR][1000 genomes]
rs72898014	1.00[AMR][1000 genomes]
rs73848851	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834745	chr3:79055426-79227937	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:79135800-79137000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr3:79136000-79138400	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr3:79136400-79137800	Enhancers	iPS-20b Cell Line	embryonic stem cell
4	chr3:79136400-79138000	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr3:79136400-79138000	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr3:79136400-79138200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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