Variant report

Variant	rs73848984
Chromosome Location	chr4:130204311-130204312
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10518544	1.00[ASN][1000 genomes]
rs1355962	1.00[ASN][1000 genomes]
rs4276290	0.91[EUR][1000 genomes]
rs542391	1.00[ASN][1000 genomes]
rs6825050	0.91[EUR][1000 genomes]
rs6837329	1.00[ASN][1000 genomes]
rs6854308	1.00[ASN][1000 genomes]
rs72933964	1.00[ASN][1000 genomes]
rs73848973	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73848974	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73848975	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73848976	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73848979	0.84[EUR][1000 genomes]
rs73848981	0.81[EUR][1000 genomes]
rs73848982	0.91[EUR][1000 genomes]
rs73848983	0.91[EUR][1000 genomes]
rs7675795	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7697228	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534538	chr4:129799138-130431688	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv830058	chr4:130136025-130315471	Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv879932	chr4:130167642-130264517	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:130203600-130206000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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