Variant report

Variant	rs73850496
Chromosome Location	chr3:80063137-80063138
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 110 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:110 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428088	chr3:79934080-80112721	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv590740	chr3:79999534-80575042	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv997786	chr3:80008898-80489031	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv536598	chr3:80008898-80489031	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv877030	chr3:80013063-80444843	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	nsv1014658	chr3:80035786-80716259	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
7	nsv536599	chr3:80035786-80716259	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
8	nsv997720	chr3:80035786-80745662	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
9	esv1837825	chr3:80054997-80064020	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv1797193	chr3:80057453-80064447	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
11	esv1821842	chr3:80057453-80064447	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
12	esv1794893	chr3:80060377-80064264	Weak transcription	n/a	n/a	inside rSNPs	n/a
13	nsv511205	chr3:80060377-80064264	Weak transcription	n/a	n/a	inside rSNPs	n/a
14	esv1815617	chr3:80060377-80064447	Weak transcription	n/a	n/a	inside rSNPs	n/a
15	esv1821801	chr3:80060377-80064447	Weak transcription	n/a	n/a	inside rSNPs	n/a
16	esv1823723	chr3:80060377-80064447	Weak transcription	n/a	n/a	inside rSNPs	n/a
17	esv1834587	chr3:80060377-80064447	Weak transcription	n/a	n/a	inside rSNPs	n/a
18	esv1838372	chr3:80060377-80064447	Weak transcription	n/a	n/a	inside rSNPs	n/a
19	esv3409124	chr3:80060612-80066310	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
20	esv3461121	chr3:80060862-80066360	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
21	esv3391106	chr3:80061212-80063710	Weak transcription	n/a	n/a	inside rSNPs	n/a
22	nsv590741	chr3:80061504-80063846	Weak transcription	n/a	n/a	inside rSNPs	n/a
23	nsv590742	chr3:80061504-80064020	Weak transcription	n/a	n/a	inside rSNPs	n/a
24	nsv590743	chr3:80061504-80064264	Weak transcription	n/a	n/a	inside rSNPs	n/a
25	nsv590744	chr3:80061504-80064315	Weak transcription	n/a	n/a	inside rSNPs	n/a
26	nsv590745	chr3:80061504-80064447	Weak transcription	n/a	n/a	inside rSNPs	n/a
27	esv3461120	chr3:80061512-80065510	Weak transcription	n/a	n/a	inside rSNPs	n/a
28	esv3356118	chr3:80061612-80066110	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
29	esv3461122	chr3:80061787-80065510	Weak transcription	n/a	n/a	inside rSNPs	n/a
30	esv3461118	chr3:80061787-80065635	Weak transcription	n/a	n/a	inside rSNPs	n/a
31	nsv513054	chr3:80061803-80065254	Weak transcription	n/a	n/a	inside rSNPs	n/a
32	esv17166	chr3:80061822-80064536	Weak transcription	n/a	n/a	inside rSNPs	n/a
33	nsv821427	chr3:80061822-80064536	Weak transcription	n/a	n/a	inside rSNPs	n/a
34	nsv822151	chr3:80061822-80064536	Weak transcription	n/a	n/a	inside rSNPs	n/a
35	esv3464307	chr3:80062427-80064693	Weak transcription	n/a	n/a	inside rSNPs	n/a
36	esv3464308	chr3:80062427-80064693	Weak transcription	n/a	n/a	inside rSNPs	n/a
37	nsv822152	chr3:80062697-80063558	Weak transcription	n/a	n/a	inside rSNPs	n/a
38	nsv822153	chr3:80062697-80064228	Weak transcription	n/a	n/a	inside rSNPs	n/a
39	nsv822155	chr3:80062697-80064363	Weak transcription	n/a	n/a	inside rSNPs	n/a
40	nsv822156	chr3:80062697-80064494	Weak transcription	n/a	n/a	inside rSNPs	n/a
41	esv16158	chr3:80062894-80064158	Weak transcription	n/a	n/a	inside rSNPs	n/a
42	nsv590746	chr3:80062959-80063915	Weak transcription	n/a	n/a	inside rSNPs	n/a
43	nsv590747	chr3:80062959-80063966	Weak transcription	n/a	n/a	inside rSNPs	n/a
44	esv1791748	chr3:80062959-80064020	Weak transcription	n/a	n/a	inside rSNPs	n/a
45	esv1794205	chr3:80062959-80064020	Weak transcription	n/a	n/a	inside rSNPs	n/a
46	esv1812395	chr3:80062959-80064020	Weak transcription	n/a	n/a	inside rSNPs	n/a
47	esv1812490	chr3:80062959-80064020	Weak transcription	n/a	n/a	inside rSNPs	n/a
48	esv1815399	chr3:80062959-80064020	Weak transcription	n/a	n/a	inside rSNPs	n/a
49	esv1829344	chr3:80062959-80064020	Weak transcription	n/a	n/a	inside rSNPs	n/a
50	esv1829426	chr3:80062959-80064020	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:80055200-80066600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links