Variant report

Variant	rs73857420
Chromosome Location	chr3:118204535-118204536
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs56712686	1.00[AMR][1000 genomes]
rs73857419	0.81[AFR][1000 genomes]
rs73857421	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv460829	chr3:118195601-118229370	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv591349	chr3:118195601-118229370	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:118200600-118205200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr3:118200800-118207600	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr3:118202200-118207600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr3:118202600-118204600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr3:118202600-118204600	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr3:118202600-118207200	Weak transcription	HUES6 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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