Variant report

Variant	rs73861942
Chromosome Location	chr3:134491243-134491244
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs58172155	0.94[AFR][1000 genomes]
rs60298327	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73861938	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877515	chr3:134460368-134591138	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:134488000-134492000	Weak transcription	Fetal Heart	heart
2	chr3:134490400-134491600	Enhancers	Skeletal Muscle Male	skeletal muscle
3	chr3:134490400-134492400	Enhancers	Skeletal Muscle Female	skeletal muscle
4	chr3:134490800-134492000	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr3:134490800-134492000	Enhancers	Psoas Muscle	Psoas
6	chr3:134491000-134491400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr3:134491000-134492200	Enhancers	Fetal Muscle Leg	muscle
8	chr3:134491200-134492000	Enhancers	HSMMtube	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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