The 2.0 version of rSNPBase

Variant report

Variant rs73898792
Chromosome Location chr20:16469036-16469037
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:16410200-16473200 Weak transcription Primary T helper cells PMA-I stimulated --
2 chr20:16420800-16471400 Weak transcription Primary hematopoietic stem cells blood
3 chr20:16431400-16508200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr20:16443800-16469600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr20:16443800-16469600 Weak transcription Lung lung
6 chr20:16448000-16483600 Weak transcription Pancreas Pancrea
7 chr20:16449400-16500600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr20:16451200-16488400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr20:16451400-16478600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr20:16453000-16469600 Weak transcription Ovary ovary
11 chr20:16453400-16470000 Weak transcription Esophagus oesophagus
12 chr20:16453400-16473400 Weak transcription Left Ventricle heart
13 chr20:16453600-16471800 Weak transcription NHEK skin
14 chr20:16453600-16508200 Weak transcription Stomach Mucosa stomach
15 chr20:16454800-16483600 Weak transcription Spleen Spleen
16 chr20:16456200-16483800 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr20:16456800-16469200 Weak transcription Brain Hippocampus Middle brain
18 chr20:16456800-16471600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr20:16456800-16472200 Weak transcription Liver Liver
20 chr20:16456800-16473800 Weak transcription Primary B cells from cord blood blood
21 chr20:16456800-16487600 Weak transcription Brain Inferior Temporal Lobe brain
22 chr20:16456800-16488200 Weak transcription Rectal Smooth Muscle rectum
23 chr20:16458600-16476400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr20:16458600-16484200 Weak transcription A549 lung
25 chr20:16458800-16471200 Weak transcription Primary monocytes fromperipheralblood blood
26 chr20:16458800-16471200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr20:16458800-16471400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr20:16458800-16477400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr20:16458800-16480800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr20:16458800-16484000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr20:16458800-16486200 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr20:16459000-16471400 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr20:16460000-16469600 Weak transcription Fetal Stomach stomach
34 chr20:16460800-16473800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr20:16460800-16488200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr20:16461000-16471400 Weak transcription Fetal Intestine Large intestine
37 chr20:16461000-16472200 Weak transcription HepG2 liver
38 chr20:16461000-16491200 Weak transcription Placenta Placenta
39 chr20:16461200-16479600 Weak transcription Stomach Smooth Muscle stomach
40 chr20:16462000-16483800 Weak transcription Primary T cells fromperipheralblood blood
41 chr20:16462800-16471400 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr20:16463000-16498000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr20:16463800-16471600 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr20:16463800-16484000 Weak transcription Gastric stomach
45 chr20:16463800-16495000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr20:16464400-16470400 Weak transcription Adipose Nuclei Adipose
47 chr20:16464400-16471800 Weak transcription Osteobl bone
48 chr20:16464400-16491400 Weak transcription Fetal Kidney kidney
49 chr20:16464600-16471400 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr20:16464600-16484000 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015