Variant report

Variant	rs73906360
Chromosome Location	chr21:39976471-39976472
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1013070	0.84[AFR][1000 genomes]
rs56350348	0.82[AFR][1000 genomes]
rs60212067	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73429461	1.00[AMR][1000 genomes]
rs73902703	0.82[AFR][1000 genomes]
rs73906346	0.87[AFR][1000 genomes]
rs73906356	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv965955	chr21:39974678-39976565	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39969000-39976600	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr21:39970200-39977200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr21:39970400-39976600	Weak transcription	Fetal Brain Male	brain
4	chr21:39973000-39982000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr21:39974800-39977400	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr21:39975400-39977600	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr21:39975600-39977200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr21:39976000-39977200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
9	chr21:39976400-39977800	Enhancers	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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