Variant report

Variant rs73909563
Chromosome Location chr21:46875352-46875353
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46859800-46880000 Weak transcription HUVEC blood vessel
2 chr21:46860000-46888200 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr21:46862000-46887600 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr21:46866600-46880000 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr21:46868600-46875400 Weak transcription H9 Cell Line embryonic stem cell
6 chr21:46868600-46881600 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr21:46870000-46875400 Weak transcription Fetal Intestine Small intestine
8 chr21:46871200-46875400 Enhancers Spleen Spleen
9 chr21:46872200-46875600 Genic enhancers HepG2 liver
10 chr21:46872800-46875600 Enhancers Fetal Lung lung
11 chr21:46873000-46879600 Weak transcription A549 lung
12 chr21:46873000-46879800 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr21:46873200-46875400 Weak transcription H1 Cell Line embryonic stem cell
14 chr21:46873200-46875400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr21:46873200-46876200 Enhancers HMEC breast
16 chr21:46873200-46876200 Enhancers HSMM muscle
17 chr21:46873200-46876400 Enhancers Fetal Heart heart
18 chr21:46873400-46875400 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr21:46873400-46875400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
20 chr21:46873400-46875400 Enhancers Esophagus oesophagus
21 chr21:46873400-46875600 Bivalent Enhancer Fetal Muscle Trunk muscle
22 chr21:46873400-46879800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr21:46873400-46880600 Weak transcription K562 blood
24 chr21:46873400-46880800 Weak transcription Fetal Kidney kidney
25 chr21:46873400-46881600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr21:46873600-46875600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr21:46873600-46875800 Enhancers Fetal Thymus thymus
28 chr21:46873800-46875800 Weak transcription Lung lung
29 chr21:46873800-46875800 Enhancers HSMMtube muscle
30 chr21:46873800-46876000 Enhancers NH-A brain
31 chr21:46873800-46876400 Bivalent Enhancer Placenta Placenta
32 chr21:46874000-46875400 Enhancers Pancreas Pancrea
33 chr21:46874000-46875600 Enhancers NHDF-Ad bronchial
34 chr21:46874200-46875400 Enhancers Right Ventricle heart
35 chr21:46874200-46875600 Enhancers Left Ventricle heart
36 chr21:46874200-46876000 Enhancers NHEK skin
37 chr21:46874200-46876400 Enhancers Ovary ovary
38 chr21:46874400-46875400 Flanking Active TSS Liver Liver
39 chr21:46874400-46875800 Bivalent Enhancer Fetal Stomach stomach
40 chr21:46874400-46876200 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
41 chr21:46874600-46875400 Enhancers Stomach Mucosa stomach
42 chr21:46874600-46875600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr21:46874600-46876000 Flanking Active TSS NHLF lung
44 chr21:46874600-46876200 Flanking Active TSS Adipose Nuclei Adipose
45 chr21:46874600-46876400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr21:46874600-46877000 Weak transcription Gastric stomach
47 chr21:46874800-46875400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr21:46874800-46875600 Flanking Active TSS Brain Substantia Nigra brain
49 chr21:46874800-46875600 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr21:46874800-46875600 Flanking Active TSS Stomach Smooth Muscle stomach

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