Variant report

Variant rs73909577
Chromosome Location chr21:46889999-46890000
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46882800-46899000 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr21:46885400-46894400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr21:46885600-46890000 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
4 chr21:46885600-46891000 Weak transcription GM12878-XiMat blood
5 chr21:46886000-46891800 Weak transcription Fetal Heart heart
6 chr21:46886000-46893200 Enhancers Brain Hippocampus Middle brain
7 chr21:46886200-46890400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
8 chr21:46886600-46890200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
9 chr21:46886600-46890400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr21:46887000-46890000 Strong transcription HUES6 Cell Line embryonic stem cell
11 chr21:46887800-46890000 Strong transcription HUES48 Cell Line embryonic stem cell
12 chr21:46887800-46890200 Strong transcription iPS-20b Cell Line embryonic stem cell
13 chr21:46888200-46890000 Strong transcription HUES64 Cell Line embryonic stem cell
14 chr21:46888200-46890000 Genic enhancers Fetal Muscle Trunk muscle
15 chr21:46888600-46890200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr21:46888600-46890800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr21:46888600-46892600 Weak transcription H9 Cell Line embryonic stem cell
18 chr21:46888800-46890000 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr21:46888800-46891800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr21:46888800-46893400 Enhancers Brain Cingulate Gyrus brain
21 chr21:46889000-46892000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr21:46889000-46892800 Enhancers Fetal Intestine Large intestine
23 chr21:46889000-46893200 Enhancers Brain Substantia Nigra brain
24 chr21:46889200-46890000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr21:46889200-46890000 Weak transcription Colonic Mucosa Colon
26 chr21:46889200-46890600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
27 chr21:46889200-46891400 Enhancers Fetal Lung lung
28 chr21:46889200-46891400 Enhancers Fetal Stomach stomach
29 chr21:46889200-46891600 Enhancers Gastric stomach
30 chr21:46889200-46892000 Enhancers Brain Angular Gyrus brain
31 chr21:46889200-46892400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr21:46889200-46893000 Enhancers Brain Inferior Temporal Lobe brain
33 chr21:46889200-46893200 Enhancers Brain Anterior Caudate brain
34 chr21:46889400-46890000 Weak transcription Colon Smooth Muscle Colon
35 chr21:46889400-46890200 Genic enhancers Breast Myoepithelial Primary Cells Breast
36 chr21:46889400-46890200 Genic enhancers HSMM muscle
37 chr21:46889400-46890600 Weak transcription Left Ventricle heart
38 chr21:46889400-46890800 Weak transcription Aorta Aorta
39 chr21:46889400-46890800 Flanking Active TSS Liver Liver
40 chr21:46889400-46890800 Weak transcription Spleen Spleen
41 chr21:46889400-46891200 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr21:46889400-46891200 Enhancers Skeletal Muscle Male skeletal muscle
43 chr21:46889400-46891400 Enhancers Duodenum Mucosa Duodenum
44 chr21:46889400-46891400 Enhancers NHDF-Ad bronchial
45 chr21:46889400-46892200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr21:46889600-46890000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
47 chr21:46889600-46890000 Enhancers Rectal Mucosa Donor 29 rectum
48 chr21:46889600-46890000 Genic enhancers NHEK skin
49 chr21:46889600-46890200 Enhancers Pancreas Pancrea
50 chr21:46889600-46890200 Genic enhancers HUVEC blood vessel

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