Variant report

Variant	rs73917610
Chromosome Location	chr2:11086769-11086770
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs12614603	0.81[EUR][1000 genomes]
rs12620687	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833392	chr2:11054580-11235239	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:11076600-11087600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr2:11079800-11087200	Weak transcription	A549	lung
3	chr2:11080800-11092000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr2:11081400-11104600	Weak transcription	Right Atrium	heart
5	chr2:11085800-11088000	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr2:11086200-11088200	Enhancers	Fetal Brain Male	brain
7	chr2:11086200-11088200	Enhancers	NHLF	lung
8	chr2:11086200-11088600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr2:11086400-11087600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr2:11086400-11088000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr2:11086400-11088000	Enhancers	NH-A	brain
12	chr2:11086400-11088200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr2:11086600-11087000	Enhancers	Muscle Satellite Cultured Cells	--
14	chr2:11086600-11087400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr2:11086600-11087600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr2:11086600-11087600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr2:11086600-11087800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr2:11086600-11087800	Enhancers	HSMM	muscle
19	chr2:11086600-11088000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr2:11086600-11088000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
21	chr2:11086600-11088000	Enhancers	HMEC	breast
22	chr2:11086600-11088400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr2:11086600-11088400	Enhancers	NHDF-Ad	bronchial

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