Variant report

Variant	rs73921182
Chromosome Location	chr2:31118237-31118238
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs59126417	0.87[AFR][1000 genomes]
rs73921181	0.86[AFR][1000 genomes]
rs73921183	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833659	chr2:31020572-31171505	Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:31109000-31123800	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr2:31117400-31119800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr2:31117600-31118400	Enhancers	Left Ventricle	heart
4	chr2:31117600-31118800	Enhancers	Right Ventricle	heart
5	chr2:31117800-31125000	Weak transcription	Primary hematopoietic stem cells short term culture	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links