Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr2:33931594-33932083	GM12878	blood:	n/a	n/a
2	MAX	chr2:33931462-33931658	GM12878	blood:	n/a	n/a
3	POLR2A	chr2:33931626-33932115	GM12892	blood:	n/a	n/a
4	RCOR1	chr2:33931394-33931867	GM12878	blood:	n/a	n/a
5	EBF1	chr2:33931296-33931847	GM12878	blood:	n/a	n/a
6	TAF1	chr2:33931410-33931717	PFSK-1	brain:	n/a	n/a
7	BHLHE40	chr2:33931274-33931873	GM12878	blood:	n/a	n/a
8	REST	chr2:33931352-33931807	PFSK-1	brain:	n/a	n/a
9	EP300	chr2:33931360-33931815	GM12878	blood:	n/a	n/a
10	SPI1	chr2:33931524-33931715	GM12878	blood:	n/a	n/a
11	MXI1	chr2:33931507-33931711	GM12878	blood:	n/a	n/a
12	TBL1XR1	chr2:33931269-33931797	GM12878	blood:	n/a	n/a
13	TCF12	chr2:33931614-33931811	GM12878	blood:	n/a	n/a
14	EP300	chr2:33931368-33931688	GM12878	blood:	n/a	n/a
15	CHD2	chr2:33931345-33932144	GM12878	blood:	n/a	n/a
16	EP300	chr2:33931112-33931728	GM12878	blood:	n/a	n/a
17	TBP	chr2:33931374-33932078	GM12878	blood:	n/a	n/a
18	BCL11A	chr2:33931333-33931739	GM12878	blood:	n/a	chr2:33931614-33931623
19	POLR2A	chr2:33931353-33932006	PFSK-1	brain:	n/a	n/a
20	MAZ	chr2:33931394-33931729	GM12878	blood:	n/a	n/a
21	ELK1	chr2:33931412-33931699	GM12878	blood:	n/a	n/a
22	POU2F2	chr2:33931347-33931797	GM12878	blood:	n/a	chr2:33931629-33931641

Variant related genes	Relation type
ENSG00000203386	TF binding region

rSNPs within LD-proxies of this variant (count:3)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3350238	chr2:33849408-33979026	Enhancers Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:33929000-33931800	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr2:33930000-33932000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr2:33930000-33937400	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr2:33930200-33937000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr2:33930200-33937000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr2:33930400-33937000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
7	chr2:33930600-33935000	Weak transcription	HUVEC	blood vessel

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