Variant report

Variant	rs73953475
Chromosome Location	chr18:40183905-40183906
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs55917315	0.90[AFR][1000 genomes]
rs56372756	0.90[AFR][1000 genomes]
rs56712294	0.90[AFR][1000 genomes]
rs57011572	1.00[AFR][1000 genomes]
rs59721155	0.90[AFR][1000 genomes]
rs7234447	0.90[AFR][1000 genomes]
rs73953413	0.81[AFR][1000 genomes]
rs73953414	0.90[AFR][1000 genomes]
rs73953415	0.90[AFR][1000 genomes]
rs73953419	0.90[AFR][1000 genomes]
rs73953420	0.90[AFR][1000 genomes]
rs73953422	0.90[AFR][1000 genomes]
rs73953425	0.90[AFR][1000 genomes]
rs73953429	0.90[AFR][1000 genomes]
rs73953431	0.90[AFR][1000 genomes]
rs73953432	0.90[AFR][1000 genomes]
rs73953437	0.90[AFR][1000 genomes]
rs73953452	0.83[AFR][1000 genomes]
rs73953478	0.83[AFR][1000 genomes]
rs8087416	0.90[AFR][1000 genomes]
rs8089984	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3447158	chr18:40045478-40320720	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv525717	chr18:40182606-40185786	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:40179600-40186600	Weak transcription	Adipose Nuclei	Adipose

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links