Variant report

Variant	rs73955478
Chromosome Location	chr2:114780155-114780156
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs73955482	1.00[AFR][1000 genomes]
rs73955483	1.00[AFR][1000 genomes]
rs73955484	0.95[AFR][1000 genomes]
rs73955485	0.92[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874904	chr2:114751691-115605062	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114778400-114786400	Weak transcription	Pancreas	Pancrea
2	chr2:114779200-114780600	Enhancers	HepG2	liver
3	chr2:114779400-114781400	Enhancers	HMEC	breast
4	chr2:114779400-114782000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr2:114779600-114780600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr2:114779600-114780800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr2:114779600-114780800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr2:114779600-114780800	Enhancers	NHEK	skin
9	chr2:114779600-114781400	Enhancers	Osteobl	bone
10	chr2:114779600-114781600	Enhancers	NHLF	lung
11	chr2:114779800-114780800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr2:114779800-114780800	Enhancers	Muscle Satellite Cultured Cells	--
13	chr2:114779800-114780800	Enhancers	NHDF-Ad	bronchial
14	chr2:114779800-114781200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr2:114780000-114780200	Enhancers	NH-A	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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