The 2.0 version of rSNPBase

Variant report

Variant rs73976550
Chromosome Location chr2:172952859-172952860
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172946400-172953200 Bivalent/Poised TSS Brain Germinal Matrix brain
2 chr2:172947400-172953000 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
3 chr2:172949200-172953200 Enhancers Gastric stomach
4 chr2:172949800-172960800 Bivalent/Poised TSS Fetal Brain Female brain
5 chr2:172950000-172953600 Bivalent Enhancer Stomach Mucosa stomach
6 chr2:172950400-172953600 Bivalent Enhancer Primary T cells fromperipheralblood blood
7 chr2:172950400-172953600 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
8 chr2:172950400-172953600 Bivalent Enhancer Fetal Thymus thymus
9 chr2:172950400-172959000 Weak transcription Hela-S3 cervix
10 chr2:172950600-172953200 Bivalent Enhancer Spleen Spleen
11 chr2:172950600-172953400 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
12 chr2:172950600-172953600 Bivalent Enhancer Primary monocytes fromperipheralblood blood
13 chr2:172950800-172953400 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr2:172950800-172953600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
15 chr2:172950800-172953600 Bivalent Enhancer Fetal Muscle Trunk muscle
16 chr2:172950800-172953600 Bivalent Enhancer Fetal Muscle Leg muscle
17 chr2:172951200-172954600 Weak transcription HSMMtube muscle
18 chr2:172951400-172953000 Bivalent Enhancer iPS DF 6.9 Cell Line embryonic stem cell
19 chr2:172951400-172953000 Bivalent Enhancer Primary T helper memory cells from peripheral blood 2 blood
20 chr2:172951400-172953200 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
21 chr2:172951400-172954800 Transcr. at gene 5' and 3' Ganglion Eminence derived primary cultured neurospheres brain
22 chr2:172951400-172955600 Weak transcription Dnd41 blood
23 chr2:172951600-172953400 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
24 chr2:172951800-172953000 Bivalent Enhancer Primary hematopoietic stem cells blood
25 chr2:172951800-172953000 Bivalent/Poised TSS Fetal Stomach stomach
26 chr2:172951800-172953000 Enhancers Pancreas Pancrea
27 chr2:172951800-172953400 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr2:172951800-172953400 Bivalent Enhancer Primary T regulatory cells fromperipheralblood blood
29 chr2:172951800-172953400 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
30 chr2:172951800-172957600 Weak transcription K562 blood
31 chr2:172952000-172953000 Flanking Bivalent TSS/Enh H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr2:172952000-172953400 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
33 chr2:172952000-172953600 Bivalent Enhancer Primary T helper 17 cells PMA-I stimulated --
34 chr2:172952000-172953800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
35 chr2:172952200-172953000 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
36 chr2:172952200-172953200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr2:172952200-172953600 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
38 chr2:172952200-172953600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr2:172952400-172953000 Bivalent Enhancer Duodenum Mucosa Duodenum
40 chr2:172952400-172953400 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr2:172952600-172953000 Flanking Bivalent TSS/Enh HUES64 Cell Line embryonic stem cell
42 chr2:172952600-172953000 Bivalent/Poised TSS Cortex derived primary cultured neurospheres brain
43 chr2:172952600-172953000 Bivalent Enhancer Left Ventricle heart
44 chr2:172952600-172953200 Flanking Bivalent TSS/Enh hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr2:172952600-172953200 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
46 chr2:172952600-172953200 Bivalent Enhancer Primary B cells from peripheral blood blood
47 chr2:172952600-172953200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
48 chr2:172952600-172953200 Enhancers Right Ventricle heart
49 chr2:172952600-172953400 Bivalent Enhancer Lung lung
50 chr2:172952600-172953600 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015