The 2.0 version of rSNPBase

Variant report

Variant rs73977740
Chromosome Location chr2:173830146-173830147
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173807800-173831600 Weak transcription Left Ventricle heart
2 chr2:173816600-173831800 Weak transcription Lung lung
3 chr2:173820800-173830400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr2:173822400-173835000 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr2:173823000-173832200 Weak transcription Brain Hippocampus Middle brain
6 chr2:173824000-173830600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr2:173825200-173830200 Weak transcription Brain Anterior Caudate brain
8 chr2:173826600-173830400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
9 chr2:173827000-173831600 Weak transcription Pancreas Pancrea
10 chr2:173827600-173832200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr2:173828000-173830600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr2:173828000-173832400 Weak transcription Hela-S3 cervix
13 chr2:173828000-173832600 Weak transcription HMEC breast
14 chr2:173828000-173833200 Weak transcription Primary T cells from cord blood blood
15 chr2:173828400-173831600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr2:173828400-173832800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr2:173828600-173830600 Weak transcription Adipose Nuclei Adipose
18 chr2:173828600-173833400 Weak transcription Primary monocytes fromperipheralblood blood
19 chr2:173828600-173835600 Weak transcription Fetal Intestine Large intestine
20 chr2:173829000-173842800 Weak transcription Brain Cingulate Gyrus brain
21 chr2:173829200-173830200 Enhancers Fetal Brain Male brain
22 chr2:173829200-173830400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
23 chr2:173829200-173830600 Enhancers NHLF lung
24 chr2:173829200-173831800 Weak transcription Stomach Smooth Muscle stomach
25 chr2:173829200-173832400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr2:173829200-173832800 Weak transcription Aorta Aorta
27 chr2:173829400-173830400 Enhancers H9 Cell Line embryonic stem cell
28 chr2:173829400-173830400 Enhancers HUES6 Cell Line embryonic stem cell
29 chr2:173829400-173830400 Enhancers Fetal Thymus thymus
30 chr2:173829400-173830600 Enhancers Fetal Brain Female brain
31 chr2:173829400-173831000 Weak transcription HUVEC blood vessel
32 chr2:173829400-173832000 Enhancers Brain Germinal Matrix brain
33 chr2:173829400-173832000 Weak transcription Fetal Heart heart
34 chr2:173829400-173834200 Strong transcription Cortex derived primary cultured neurospheres brain
35 chr2:173829600-173830200 Enhancers HUES64 Cell Line embryonic stem cell
36 chr2:173829600-173830400 Enhancers HUES48 Cell Line embryonic stem cell
37 chr2:173829600-173830400 Enhancers iPS-20b Cell Line embryonic stem cell
38 chr2:173829600-173830400 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr2:173829600-173830600 Enhancers iPS-15b Cell Line embryonic stem cell
40 chr2:173829600-173830600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr2:173829600-173830800 Strong transcription Fetal Adrenal Gland Adrenal Gland
42 chr2:173829800-173830200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr2:173829800-173832400 Weak transcription NHDF-Ad bronchial
44 chr2:173830000-173830200 Enhancers Thymus Thymus
45 chr2:173830000-173831600 Enhancers Liver Liver

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Last update: Aug 31, 2015