The 2.0 version of rSNPBase

Variant report

Variant rs73979044
Chromosome Location chr2:190572681-190572682
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190540200-190578000 Weak transcription Fetal Brain Male brain
2 chr2:190540400-190576400 Weak transcription Fetal Muscle Trunk muscle
3 chr2:190540800-190576400 Weak transcription Pancreas Pancrea
4 chr2:190540800-190592600 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr2:190540800-190611800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr2:190540800-190618400 Weak transcription Brain Cingulate Gyrus brain
7 chr2:190541600-190617000 Weak transcription Colon Smooth Muscle Colon
8 chr2:190543600-190575400 Weak transcription Fetal Intestine Large intestine
9 chr2:190546200-190576400 Weak transcription Lung lung
10 chr2:190550600-190579000 Weak transcription Spleen Spleen
11 chr2:190550800-190576200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr2:190550800-190576400 Weak transcription Fetal Muscle Leg muscle
13 chr2:190550800-190577600 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr2:190550800-190578400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr2:190550800-190579000 Weak transcription Fetal Thymus thymus
16 chr2:190550800-190579400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr2:190550800-190591400 Weak transcription Primary T cells fromperipheralblood blood
18 chr2:190550800-190617000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr2:190550800-190626800 Weak transcription Right Ventricle heart
20 chr2:190551200-190603400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr2:190551200-190617000 Weak transcription HSMM muscle
22 chr2:190552000-190576200 Weak transcription Rectal Smooth Muscle rectum
23 chr2:190553200-190576200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr2:190555600-190593000 Weak transcription Fetal Lung lung
25 chr2:190556400-190576400 Weak transcription Fetal Brain Female brain
26 chr2:190557400-190617000 Weak transcription Brain Angular Gyrus brain
27 chr2:190559200-190576200 Weak transcription Fetal Intestine Small intestine
28 chr2:190559400-190576400 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr2:190563000-190574200 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr2:190563400-190607800 Weak transcription Primary T cells from cord blood blood
31 chr2:190563600-190576400 Weak transcription Aorta Aorta
32 chr2:190563600-190593200 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr2:190563600-190608400 Weak transcription Brain Anterior Caudate brain
34 chr2:190563600-190611800 Weak transcription Brain Substantia Nigra brain
35 chr2:190563600-190612600 Weak transcription Brain Inferior Temporal Lobe brain
36 chr2:190563800-190576200 Weak transcription Primary hematopoietic stem cells blood
37 chr2:190564000-190593200 Weak transcription Liver Liver
38 chr2:190564400-190576400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr2:190564400-190576600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr2:190564400-190578200 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr2:190564800-190577800 Weak transcription Stomach Mucosa stomach
42 chr2:190568200-190594200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:190568200-190611600 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr2:190570000-190573000 Strong transcription Rectal Mucosa Donor 29 rectum
45 chr2:190570000-190573200 Strong transcription Adipose Nuclei Adipose
46 chr2:190570000-190576400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr2:190570400-190574400 Weak transcription Primary B cells from peripheral blood blood
48 chr2:190571200-190576200 Weak transcription Fetal Stomach stomach
49 chr2:190571200-190576400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr2:190571200-190576400 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015