Variant report

Variant	rs73984068
Chromosome Location	chr2:210385778-210385779
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs73984064	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834519	chr2:210271017-210400153	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:210364600-210387600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr2:210364600-210392200	Weak transcription	Pancreas	Pancrea
3	chr2:210366600-210387800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr2:210371400-210391000	Weak transcription	Aorta	Aorta
5	chr2:210378800-210385800	Weak transcription	Fetal Brain Male	brain
6	chr2:210378800-210390200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr2:210382200-210391600	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr2:210383000-210391000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr2:210383200-210386200	Enhancers	Brain Germinal Matrix	brain
10	chr2:210384000-210386000	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
11	chr2:210384000-210386000	Enhancers	Fetal Brain Female	brain
12	chr2:210384000-210386600	Enhancers	Pancreatic Islets	Pancreatic Islet
13	chr2:210384000-210388600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr2:210384800-210385800	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
15	chr2:210384800-210385800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
16	chr2:210385200-210387000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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