Variant report

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs56344314	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34128	chr2:212581485-212857122	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv834525	chr2:212693190-212860356	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212788400-212795000	Weak transcription	Fetal Heart	heart
2	chr2:212790800-212792800	Enhancers	Brain Inferior Temporal Lobe	brain
3	chr2:212791000-212792800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr2:212791600-212794400	Enhancers	Brain Substantia Nigra	brain
5	chr2:212791600-212800200	Weak transcription	Aorta	Aorta
6	chr2:212791800-212793000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr2:212792000-212792800	Enhancers	Brain Anterior Caudate	brain
8	chr2:212792000-212792800	Enhancers	Brain Cingulate Gyrus	brain
9	chr2:212792200-212792800	Enhancers	Brain Hippocampus Middle	brain
10	chr2:212792200-212793600	Enhancers	Brain Angular Gyrus	brain
11	chr2:212792200-212796600	Enhancers	Cortex derived primary cultured neurospheres	brain
12	chr2:212792200-212796800	Enhancers	Dnd41	blood
13	chr2:212792400-212794000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr2:212792600-212796400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr2:212792800-212793000	Active TSS	Brain Inferior Temporal Lobe	brain
16	chr2:212792800-212793400	Flanking Active TSS	Brain Anterior Caudate	brain
17	chr2:212792800-212793400	Flanking Active TSS	Brain Cingulate Gyrus	brain
18	chr2:212792800-212793600	Flanking Active TSS	Brain Hippocampus Middle	brain
19	chr2:212792800-212794400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr2:212792800-212794400	Enhancers	Thymus	Thymus

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