Variant report

Variant	rs73998352
Chromosome Location	chr2:234220931-234220932
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs56273947	1.00[AMR][1000 genomes]
rs60188595	1.00[AMR][1000 genomes]
rs6707862	1.00[AMR][1000 genomes]
rs73998355	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv584699	chr2:234182240-234255547	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv584700	chr2:234199401-234364426	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:234219400-234222600	Enhancers	Primary B cells from peripheral blood	blood
2	chr2:234219600-234222600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
3	chr2:234220200-234221600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
4	chr2:234220200-234222200	Enhancers	GM12878-XiMat	blood
5	chr2:234220200-234222600	Enhancers	Primary B cells from cord blood	blood
6	chr2:234220400-234221600	Weak transcription	Spleen	Spleen

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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