The 2.0 version of rSNPBase

Variant report

Variant rs74009078
Chromosome Location chr15:40267110-40267111
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:40227200-40268400 Weak transcription Esophagus oesophagus
2 chr15:40227400-40283400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr15:40227800-40268400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr15:40228200-40323800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr15:40231000-40268400 Strong transcription HUES6 Cell Line embryonic stem cell
6 chr15:40236600-40303000 Weak transcription Small Intestine intestine
7 chr15:40238000-40277800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr15:40238600-40268200 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr15:40238600-40272200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr15:40238800-40273200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr15:40240800-40268000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr15:40241000-40268600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr15:40241200-40272600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr15:40249000-40304800 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr15:40250000-40294800 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr15:40250200-40299600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr15:40253000-40273200 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr15:40253000-40273800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr15:40253200-40273200 Strong transcription Primary monocytes fromperipheralblood blood
20 chr15:40254000-40268400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr15:40257200-40272200 Strong transcription Primary hematopoietic stem cells short term culture blood
22 chr15:40257400-40268600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr15:40257800-40267800 Strong transcription Fetal Adrenal Gland Adrenal Gland
24 chr15:40258200-40268600 Weak transcription Gastric stomach
25 chr15:40260200-40268400 Weak transcription Psoas Muscle Psoas
26 chr15:40260200-40268600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr15:40260200-40268600 Weak transcription Pancreas Pancrea
28 chr15:40260400-40268200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr15:40260800-40268400 Weak transcription Brain Angular Gyrus brain
30 chr15:40260800-40268400 Weak transcription Brain Germinal Matrix brain
31 chr15:40260800-40268400 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr15:40260800-40303400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr15:40261000-40268400 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr15:40261000-40268400 Weak transcription Brain Anterior Caudate brain
35 chr15:40261000-40268400 Weak transcription Colonic Mucosa Colon
36 chr15:40261000-40268600 Weak transcription Aorta Aorta
37 chr15:40261000-40277800 Weak transcription A549 lung
38 chr15:40261400-40268400 Weak transcription Brain Cingulate Gyrus brain
39 chr15:40261400-40268400 Weak transcription Brain Inferior Temporal Lobe brain
40 chr15:40261400-40268400 Weak transcription Fetal Brain Male brain
41 chr15:40261600-40268400 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr15:40262600-40267400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr15:40262600-40268400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr15:40262600-40268400 Strong transcription Osteobl bone
45 chr15:40262600-40293800 Weak transcription Stomach Mucosa stomach
46 chr15:40262800-40267600 Weak transcription Rectal Smooth Muscle rectum
47 chr15:40262800-40268400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr15:40263000-40268400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr15:40263400-40267800 Strong transcription Primary B cells from cord blood blood
50 chr15:40263600-40267400 Strong transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015