Variant report

Variant	rs74011160
Chromosome Location	chr15:40771110-40771111
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs7172014	1.00[AFR][1000 genomes]
rs74011158	1.00[AFR][1000 genomes]
rs74011159	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34145	chr15:40549617-40889824	Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:40764600-40771400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr15:40765000-40772400	Weak transcription	Esophagus	oesophagus
3	chr15:40765000-40773400	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr15:40767600-40771400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr15:40769800-40771200	Enhancers	K562	blood
6	chr15:40770400-40771200	Enhancers	Hela-S3	cervix
7	chr15:40770800-40774400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr15:40771000-40771400	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chr15:40771000-40771600	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin02	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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