Variant report

Variant	rs74041621
Chromosome Location	chr14:32913199-32913200
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs73256770	1.00[AMR][1000 genomes]
rs73256773	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758352	chr14:32858480-33016442	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2759978	chr14:32858480-33016442	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32899000-32913400	Weak transcription	Fetal Lung	lung
2	chr14:32904600-32913400	Weak transcription	Brain Germinal Matrix	brain
3	chr14:32908600-32915600	Weak transcription	Duodenum Smooth Muscle	Duodenum
4	chr14:32908600-32920200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr14:32908600-32920200	Weak transcription	Rectal Smooth Muscle	rectum
6	chr14:32908800-32919000	Weak transcription	Right Ventricle	heart
7	chr14:32909000-32919000	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr14:32909000-32919000	Weak transcription	Ovary	ovary
9	chr14:32909000-32923400	Weak transcription	Stomach Smooth Muscle	stomach
10	chr14:32911800-32918800	Weak transcription	Aorta	Aorta
11	chr14:32912400-32913400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr14:32912600-32914600	Enhancers	Brain Angular Gyrus	brain
13	chr14:32912600-32915200	Enhancers	Brain Inferior Temporal Lobe	brain
14	chr14:32912800-32913400	Enhancers	Brain Substantia Nigra	brain
15	chr14:32912800-32913800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr14:32912800-32914400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
17	chr14:32912800-32914600	Enhancers	Brain Cingulate Gyrus	brain
18	chr14:32913000-32913400	Flanking Active TSS	Brain Hippocampus Middle	brain
19	chr14:32913000-32914200	Enhancers	Brain Anterior Caudate	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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