Variant report

Variant	rs74058139
Chromosome Location	chr14:64944441-64944442
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:64808415..64811842-chr14:64942853..64946477,3	K562	blood:
2	chr14:64936676..64945278-chr14:64966734..64972845,13	MCF-7	breast:
3	chr14:64852943..64855258-chr14:64944009..64946948,2	MCF-7	breast:
4	chr14:64943497..64946226-chr14:64970959..64972915,2	K562	blood:
5	chr14:64932117..64934618-chr14:64944304..64946764,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000179841	Chromatin interaction
ENSG00000100714	Chromatin interaction
ENSG00000126804	Chromatin interaction
ENSG00000089775	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs11551976	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902022	chr14:64926581-64958638	Weak transcription Genic enhancers Active TSS Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:89 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:64928200-64948000	Weak transcription	Hela-S3	cervix
2	chr14:64933000-64946000	Weak transcription	Left Ventricle	heart
3	chr14:64933000-64946600	Weak transcription	Fetal Thymus	thymus
4	chr14:64933000-64951000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr14:64933000-64951000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr14:64933000-64951600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr14:64933000-64951800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr14:64933000-64952000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr14:64933000-64953400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr14:64933000-64953600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
11	chr14:64933000-64953600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr14:64933000-64953600	Weak transcription	Lung	lung
13	chr14:64933000-64953600	Weak transcription	Ovary	ovary
14	chr14:64933000-64953600	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr14:64933000-64953600	Weak transcription	Skeletal Muscle Female	skeletal muscle
16	chr14:64933000-64953600	Weak transcription	HSMM	muscle
17	chr14:64933000-64953600	Weak transcription	NHLF	lung
18	chr14:64933200-64944600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
19	chr14:64933200-64951000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr14:64933200-64951000	Weak transcription	Primary B cells from peripheral blood	blood
21	chr14:64933200-64951000	Weak transcription	Stomach Smooth Muscle	stomach
22	chr14:64933200-64951600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr14:64933200-64951800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr14:64933200-64953600	Weak transcription	Primary B cells from cord blood	blood
25	chr14:64933200-64953600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr14:64933200-64953600	Weak transcription	Brain Inferior Temporal Lobe	brain
27	chr14:64933200-64953600	Weak transcription	NHEK	skin
28	chr14:64933200-64953800	Weak transcription	Fetal Brain Female	brain
29	chr14:64933200-64953800	Weak transcription	Skeletal Muscle Male	skeletal muscle
30	chr14:64933200-64968400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
31	chr14:64933400-64946000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
32	chr14:64933400-64946400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr14:64933400-64953600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr14:64933400-64953600	Weak transcription	Brain Hippocampus Middle	brain
35	chr14:64933400-64953600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
36	chr14:64933400-64953600	Weak transcription	Fetal Stomach	stomach
37	chr14:64933400-64953600	Weak transcription	NH-A	brain
38	chr14:64933400-64968200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
39	chr14:64933600-64951600	Weak transcription	Brain Angular Gyrus	brain
40	chr14:64933600-64953600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
41	chr14:64933800-64950600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
42	chr14:64934000-64953600	Weak transcription	Thymus	Thymus
43	chr14:64934200-64953800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
44	chr14:64934400-64951000	Weak transcription	Liver	Liver
45	chr14:64934400-64953600	Weak transcription	Adipose Nuclei	Adipose
46	chr14:64934800-64951800	Weak transcription	Rectal Mucosa Donor 29	rectum
47	chr14:64935200-64951200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr14:64935200-64951600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
49	chr14:64935400-64947200	Weak transcription	Dnd41	blood
50	chr14:64935400-64951600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood

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