Variant report

Variant	rs74064461
Chromosome Location	chr14:80679264-80679265
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs74064459	1.00[AMR][1000 genomes]
rs74064469	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045241	chr14:79885361-80734201	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv902113	chr14:80172094-80929699	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	nsv534191	chr14:80674955-80736720	Enhancers Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:80677800-80680000	Weak transcription	Pancreas	Pancrea
2	chr14:80677800-80681400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr14:80677800-80681400	Weak transcription	Esophagus	oesophagus
4	chr14:80677800-80682000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr14:80678400-80679600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr14:80678600-80679800	Weak transcription	Placenta	Placenta
7	chr14:80678600-80681400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr14:80678600-80681400	Weak transcription	HSMM	muscle
9	chr14:80678600-80682000	Weak transcription	Adipose Nuclei	Adipose
10	chr14:80678600-80682200	Weak transcription	Skeletal Muscle Male	skeletal muscle
11	chr14:80678600-80682400	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr14:80678600-80682400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr14:80678600-80682400	Weak transcription	Skeletal Muscle Female	skeletal muscle
14	chr14:80678800-80680200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr14:80678800-80680600	Enhancers	Hela-S3	cervix
16	chr14:80678800-80681200	Weak transcription	HSMMtube	muscle
17	chr14:80678800-80681400	Weak transcription	Muscle Satellite Cultured Cells	--
18	chr14:80678800-80682000	Weak transcription	HUES6 Cell Line	embryonic stem cell
19	chr14:80678800-80682000	Weak transcription	Stomach Mucosa	stomach
20	chr14:80678800-80682200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
21	chr14:80678800-80682200	Weak transcription	Rectal Mucosa Donor 31	rectum
22	chr14:80678800-80682600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
23	chr14:80679000-80680200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr14:80679000-80680200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr14:80679000-80681400	Enhancers	A549	lung
26	chr14:80679000-80682200	Weak transcription	HUES64 Cell Line	embryonic stem cell
27	chr14:80679000-80683600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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