The 2.0 version of rSNPBase

Variant report

Variant rs74089110
Chromosome Location chr12:48522153-48522154
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:48513400-48524800 Weak transcription Liver Liver
2 chr12:48513400-48526600 Weak transcription Spleen Spleen
3 chr12:48513600-48526400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr12:48513600-48527000 Weak transcription Pancreas Pancrea
5 chr12:48513800-48524400 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr12:48513800-48525000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr12:48513800-48525000 Weak transcription Lung lung
8 chr12:48513800-48525800 Weak transcription Placenta Amnion Placenta Amnion
9 chr12:48513800-48526000 Weak transcription Colonic Mucosa Colon
10 chr12:48513800-48526400 Weak transcription Gastric stomach
11 chr12:48513800-48526600 Weak transcription Thymus Thymus
12 chr12:48513800-48526800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr12:48514000-48522200 Weak transcription Adipose Nuclei Adipose
14 chr12:48514000-48523200 Weak transcription Fetal Kidney kidney
15 chr12:48514000-48524200 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr12:48514000-48524200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr12:48514000-48524600 Weak transcription Primary T cells fromperipheralblood blood
18 chr12:48514000-48525000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr12:48514000-48525000 Weak transcription Brain Substantia Nigra brain
20 chr12:48514000-48525000 Weak transcription Esophagus oesophagus
21 chr12:48514000-48525600 Weak transcription Placenta Placenta
22 chr12:48514000-48526400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr12:48514000-48526600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr12:48514000-48526600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr12:48514000-48536600 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr12:48514000-48537200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr12:48514200-48523200 Weak transcription HSMMtube muscle
28 chr12:48514200-48527000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr12:48514400-48523200 Weak transcription Rectal Smooth Muscle rectum
30 chr12:48514400-48525400 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr12:48514400-48526400 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr12:48514600-48526200 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr12:48514800-48526000 Weak transcription Brain Hippocampus Middle brain
34 chr12:48515200-48523400 Weak transcription Dnd41 blood
35 chr12:48515400-48522200 Weak transcription Brain Inferior Temporal Lobe brain
36 chr12:48515600-48535600 Strong transcription iPS-20b Cell Line embryonic stem cell
37 chr12:48515800-48522400 Strong transcription NHDF-Ad bronchial
38 chr12:48515800-48535600 Strong transcription HUES48 Cell Line embryonic stem cell
39 chr12:48515800-48545600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr12:48516200-48529600 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr12:48516200-48545400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr12:48516200-48547200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr12:48516400-48522200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr12:48516400-48523000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr12:48516400-48524200 Strong transcription HMEC breast
46 chr12:48516400-48529400 Strong transcription Ovary ovary
47 chr12:48516400-48529600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr12:48516400-48535600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr12:48516400-48535800 Strong transcription iPS-18 Cell Line embryonic stem cell
50 chr12:48516400-48542000 Strong transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015