Variant report

Variant	rs74092370
Chromosome Location	chr14:105917497-105917498
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:105917145..105919048-chr14:105990927..105993445,2	K562	blood:
2	chr14:105916693..105918781-chr14:105941767..105944469,2	K562	blood:

Variant related genes	Relation type
ENSG00000182809	Chromatin interaction
ENSG00000184986	Chromatin interaction

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs7153174	1.00[EUR][1000 genomes]
rs73371879	1.00[EUR][1000 genomes]
rs73371887	1.00[EUR][1000 genomes]
rs73371889	1.00[EUR][1000 genomes]
rs73371895	1.00[EUR][1000 genomes]
rs74090545	1.00[EUR][1000 genomes]
rs74092358	1.00[EUR][1000 genomes]
rs74092387	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530813	chr14:105607701-106453697	Strong transcription Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	149 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:119 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:105887600-105919000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr14:105888600-105918400	Weak transcription	Colon Smooth Muscle	Colon
3	chr14:105889200-105939800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
4	chr14:105889200-105939800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr14:105897600-105927200	Weak transcription	NH-A	brain
6	chr14:105897800-105940000	Weak transcription	K562	blood
7	chr14:105898400-105931600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr14:105898400-105939800	Weak transcription	NHDF-Ad	bronchial
9	chr14:105902800-105925200	Strong transcription	Dnd41	blood
10	chr14:105902800-105937800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
11	chr14:105903200-105935400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr14:105904000-105919000	Weak transcription	Hela-S3	cervix
13	chr14:105904400-105939800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
14	chr14:105906800-105931000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr14:105907000-105921800	Weak transcription	HMEC	breast
16	chr14:105907000-105940600	Weak transcription	Small Intestine	intestine
17	chr14:105909600-105923000	Weak transcription	Primary hematopoietic stem cells	blood
18	chr14:105909800-105926800	Weak transcription	HUVEC	blood vessel
19	chr14:105910600-105925200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr14:105911000-105925600	Strong transcription	Fetal Brain Female	brain
21	chr14:105911200-105925600	Strong transcription	Thymus	Thymus
22	chr14:105912000-105937000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr14:105913200-105917600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr14:105913800-105921600	Strong transcription	Fetal Intestine Small	intestine
25	chr14:105914200-105925400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr14:105914600-105925200	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr14:105914800-105925200	Strong transcription	Fetal Thymus	thymus
28	chr14:105915000-105925600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr14:105915000-105926800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
30	chr14:105915400-105918200	Genic enhancers	Fetal Muscle Leg	muscle
31	chr14:105915400-105918600	Weak transcription	Stomach Mucosa	stomach
32	chr14:105915400-105924800	Strong transcription	HUES6 Cell Line	embryonic stem cell
33	chr14:105915400-105925200	Strong transcription	iPS-15b Cell Line	embryonic stem cell
34	chr14:105915400-105925200	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
35	chr14:105915400-105925200	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
36	chr14:105915400-105925400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr14:105915400-105925400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
38	chr14:105915400-105931000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
39	chr14:105915400-105935000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
40	chr14:105915400-105936800	Strong transcription	H1 Cell Line	embryonic stem cell
41	chr14:105915600-105923600	Strong transcription	Placenta Amnion	Placenta Amnion
42	chr14:105915600-105925200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
43	chr14:105915600-105925200	Strong transcription	HUES64 Cell Line	embryonic stem cell
44	chr14:105915600-105925200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
45	chr14:105915600-105925400	Strong transcription	Brain Germinal Matrix	brain
46	chr14:105915600-105925600	Strong transcription	Cortex derived primary cultured neurospheres	brain
47	chr14:105915600-105937000	Strong transcription	Fetal Stomach	stomach
48	chr14:105915800-105917600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
49	chr14:105915800-105917800	Strong transcription	NHEK	skin
50	chr14:105915800-105921400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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