Variant report

Variant	rs74109426
Chromosome Location	chr13:97922131-97922132
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:97918195..97920707-chr13:97920859..97922719,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs74103235	0.81[AFR][1000 genomes]
rs74108920	0.81[AFR][1000 genomes]
rs74109429	0.94[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045777	chr13:97875574-97955134	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:110 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:97910600-97927600	Weak transcription	Primary hematopoietic stem cells	blood
2	chr13:97910600-97935000	Weak transcription	Colonic Mucosa	Colon
3	chr13:97912800-97925200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr13:97913200-97924800	Weak transcription	Stomach Mucosa	stomach
5	chr13:97913600-97925200	Weak transcription	HSMMtube	muscle
6	chr13:97913600-97926600	Weak transcription	Rectal Mucosa Donor 29	rectum
7	chr13:97913800-97926600	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr13:97914200-97925200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
9	chr13:97914200-97925400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr13:97914200-97927600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
11	chr13:97914200-97927800	Weak transcription	Primary monocytes fromperipheralblood	blood
12	chr13:97914200-97960200	Weak transcription	Fetal Brain Male	brain
13	chr13:97914400-97927400	Weak transcription	Primary T helper cells PMA-I stimulated	--
14	chr13:97914400-97928000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
15	chr13:97914400-97929000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
16	chr13:97914600-97925800	Weak transcription	Duodenum Mucosa	Duodenum
17	chr13:97914600-97925800	Weak transcription	GM12878-XiMat	blood
18	chr13:97914600-97927200	Weak transcription	Primary T cells fromperipheralblood	blood
19	chr13:97914600-97927200	Weak transcription	Primary T helper cells fromperipheralblood	blood
20	chr13:97914800-97923000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
21	chr13:97914800-97925400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
22	chr13:97915400-97927800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
23	chr13:97916400-97923200	Enhancers	Skeletal Muscle Male	skeletal muscle
24	chr13:97916600-97922200	Enhancers	Brain Angular Gyrus	brain
25	chr13:97916600-97923400	Enhancers	Brain Substantia Nigra	brain
26	chr13:97917000-97922200	Enhancers	Skeletal Muscle Female	skeletal muscle
27	chr13:97917200-97925200	Weak transcription	Sigmoid Colon	Sigmoid Colon
28	chr13:97917800-97924800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr13:97917800-97925600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
30	chr13:97918200-97922400	Enhancers	Right Atrium	heart
31	chr13:97918200-97924000	Enhancers	Right Ventricle	heart
32	chr13:97918400-97922400	Enhancers	H1 Cell Line	embryonic stem cell
33	chr13:97918600-97922200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
34	chr13:97918600-97922200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr13:97918600-97922200	Enhancers	A549	lung
36	chr13:97918600-97922200	Enhancers	HMEC	breast
37	chr13:97918600-97922400	Genic enhancers	HepG2	liver
38	chr13:97919000-97935000	Weak transcription	Gastric	stomach
39	chr13:97919800-97922400	Enhancers	Psoas Muscle	Psoas
40	chr13:97919800-97922400	Enhancers	NHEK	skin
41	chr13:97919800-97924800	Weak transcription	Osteobl	bone
42	chr13:97919800-97925000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr13:97919800-97925000	Weak transcription	NHDF-Ad	bronchial
44	chr13:97919800-97926600	Weak transcription	Fetal Kidney	kidney
45	chr13:97920000-97922200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
46	chr13:97920000-97922400	Enhancers	iPS-18 Cell Line	embryonic stem cell
47	chr13:97920000-97922400	Genic enhancers	Fetal Lung	lung
48	chr13:97920000-97923400	Enhancers	Stomach Smooth Muscle	stomach
49	chr13:97920000-97931200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr13:97920200-97925200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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