Variant report

Variant rs74115501
Chromosome Location chr1:153582987-153582988
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:153578800-153584800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:153579400-153583600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
3 chr1:153579800-153583000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
4 chr1:153579800-153583600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:153580200-153584800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
6 chr1:153580400-153583200 Transcr. at gene 5' and 3' NHEK skin
7 chr1:153580600-153583200 Flanking Active TSS Duodenum Mucosa Duodenum
8 chr1:153580600-153583600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:153580800-153583000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
10 chr1:153580800-153583200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr1:153580800-153583200 Flanking Active TSS Colonic Mucosa Colon
12 chr1:153580800-153583600 Flanking Active TSS Osteobl bone
13 chr1:153581000-153583200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:153581000-153583400 Enhancers Sigmoid Colon Sigmoid Colon
15 chr1:153581000-153584000 Enhancers Colon Smooth Muscle Colon
16 chr1:153581000-153584200 Enhancers Fetal Lung lung
17 chr1:153581200-153584200 Enhancers Gastric stomach
18 chr1:153581200-153584200 Enhancers Pancreas Pancrea
19 chr1:153581400-153583600 Enhancers Ovary ovary
20 chr1:153581400-153584200 Enhancers Left Ventricle heart
21 chr1:153581400-153584800 Enhancers Fetal Heart heart
22 chr1:153581600-153583000 Transcr. at gene 5' and 3' Esophagus oesophagus
23 chr1:153581600-153583200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
24 chr1:153581600-153583200 Flanking Active TSS HMEC breast
25 chr1:153581600-153584000 Enhancers Spleen Spleen
26 chr1:153581800-153583200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
27 chr1:153581800-153583600 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr1:153581800-153583600 Enhancers Placenta Placenta
29 chr1:153581800-153583600 Flanking Active TSS A549 lung
30 chr1:153581800-153584200 Enhancers Primary monocytes fromperipheralblood blood
31 chr1:153581800-153584200 Enhancers Fetal Muscle Trunk muscle
32 chr1:153581800-153584200 Enhancers Fetal Muscle Leg muscle
33 chr1:153581800-153584200 Enhancers Right Atrium heart
34 chr1:153581800-153584200 Enhancers Monocytes-CD14+_RO01746 blood
35 chr1:153581800-153584400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:153582000-153583200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr1:153582000-153583200 Flanking Active TSS HepG2 liver
38 chr1:153582000-153583200 Flanking Active TSS HSMMtube muscle
39 chr1:153582000-153583400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:153582000-153583400 Enhancers Adipose Nuclei Adipose
41 chr1:153582000-153583600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr1:153582000-153583600 Enhancers Brain Hippocampus Middle brain
43 chr1:153582000-153583600 Genic enhancers Fetal Intestine Small intestine
44 chr1:153582000-153583800 Weak transcription Fetal Kidney kidney
45 chr1:153582000-153584000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:153582000-153584000 Enhancers Brain Anterior Caudate brain
47 chr1:153582000-153584000 Enhancers Fetal Intestine Large intestine
48 chr1:153582000-153584200 Weak transcription Aorta Aorta
49 chr1:153582000-153584200 Enhancers Lung lung
50 chr1:153582000-153584400 Enhancers Primary hematopoietic stem cells short term culture blood

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