Variant report

Variant	rs74118827
Chromosome Location	chr1:165566145-165566146
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs16847072	1.00[EUR][1000 genomes]
rs56301026	1.00[EUR][1000 genomes]
rs74118829	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429902	chr1:165531342-165574342	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165547400-165566800	Weak transcription	Psoas Muscle	Psoas
2	chr1:165562800-165566600	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr1:165564600-165566600	Weak transcription	Fetal Muscle Leg	muscle
4	chr1:165565000-165566600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr1:165565200-165566800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr1:165565400-165566600	Weak transcription	HSMM	muscle
7	chr1:165565400-165566600	Weak transcription	NHDF-Ad	bronchial
8	chr1:165565600-165566600	Weak transcription	NHLF	lung
9	chr1:165565800-165566600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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