Variant report

Variant	rs74119512
Chromosome Location	chr1:166870283-166870284
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs74119620	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916491	chr1:166000783-166948513	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:166867200-166876800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr1:166867800-166873600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr1:166869400-166871800	Enhancers	Fetal Muscle Leg	muscle
4	chr1:166869600-166871000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr1:166870200-166870400	Enhancers	Fetal Heart	heart
6	chr1:166870200-166870600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr1:166870200-166870600	Enhancers	Right Atrium	heart
8	chr1:166870200-166870800	Enhancers	HSMM	muscle
9	chr1:166870200-166871000	Enhancers	HSMMtube	muscle
10	chr1:166870200-166871200	Enhancers	Rectal Smooth Muscle	rectum
11	chr1:166870200-166871400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr1:166870200-166872800	Enhancers	Primary hematopoietic stem cells short term culture	blood
13	chr1:166870200-166875400	Enhancers	Placenta	Placenta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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