Variant report

Variant	rs74120733
Chromosome Location	chr1:165512548-165512549
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs57131010	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58101983	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120705	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120707	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120708	1.00[AMR][1000 genomes]
rs74120732	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120736	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120737	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120738	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120739	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120740	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120742	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120743	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120744	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120746	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120747	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120748	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74120749	1.00[AMR][1000 genomes]
rs74120751	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165505600-165513000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr1:165507600-165512800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr1:165510200-165513000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr1:165510400-165512800	Weak transcription	Adipose Nuclei	Adipose
5	chr1:165510400-165512800	Weak transcription	Placenta	Placenta
6	chr1:165510400-165512800	Weak transcription	Right Atrium	heart
7	chr1:165510400-165512800	Weak transcription	Right Ventricle	heart
8	chr1:165510400-165513000	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr1:165510600-165512800	Weak transcription	Left Ventricle	heart
10	chr1:165510600-165512800	Weak transcription	Psoas Muscle	Psoas
11	chr1:165510600-165513000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr1:165511000-165512800	Weak transcription	Fetal Muscle Trunk	muscle
13	chr1:165511200-165512800	Enhancers	Skeletal Muscle Male	skeletal muscle
14	chr1:165511400-165512800	Weak transcription	Fetal Muscle Leg	muscle
15	chr1:165511400-165513800	Enhancers	Fetal Lung	lung
16	chr1:165511400-165514200	Enhancers	Fetal Heart	heart
17	chr1:165511800-165512800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr1:165511800-165512800	Weak transcription	Fetal Kidney	kidney
19	chr1:165511800-165512800	Weak transcription	Gastric	stomach
20	chr1:165511800-165513000	Enhancers	Fetal Stomach	stomach
21	chr1:165512000-165512800	Weak transcription	Stomach Mucosa	stomach
22	chr1:165512200-165512600	Weak transcription	Skeletal Muscle Female	skeletal muscle
23	chr1:165512400-165512800	Weak transcription	Brain Germinal Matrix	brain
24	chr1:165512400-165513000	Enhancers	Pancreatic Islets	Pancreatic Islet
25	chr1:165512400-165513200	Enhancers	H1 Cell Line	embryonic stem cell
26	chr1:165512400-165513400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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