The 2.0 version of rSNPBase

Variant report

Variant rs74123079
Chromosome Location chr10:22833967-22833968
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:22822200-22834200 Strong transcription Primary T cells from cord blood blood
2 chr10:22822200-22856000 Weak transcription Small Intestine intestine
3 chr10:22822800-22870200 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr10:22823000-22844600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
5 chr10:22823400-22845200 Strong transcription Primary monocytes fromperipheralblood blood
6 chr10:22823600-22842200 Weak transcription Colon Smooth Muscle Colon
7 chr10:22823800-22845200 Strong transcription Primary T helper cells PMA-I stimulated --
8 chr10:22824000-22844400 Strong transcription Primary B cells from cord blood blood
9 chr10:22824000-22844800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr10:22824000-22853000 Strong transcription Primary T helper cells fromperipheralblood blood
11 chr10:22824200-22839000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr10:22824200-22840000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
13 chr10:22824400-22836400 Weak transcription NHEK skin
14 chr10:22824400-22845400 Strong transcription Primary T regulatory cells fromperipheralblood blood
15 chr10:22824600-22836200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr10:22824800-22840800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr10:22825000-22840200 Weak transcription Placenta Amnion Placenta Amnion
18 chr10:22825000-22840600 Strong transcription Primary neutrophils fromperipheralblood blood
19 chr10:22825000-22852800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr10:22825000-22863800 Weak transcription Hela-S3 cervix
21 chr10:22825200-22835400 Strong transcription Dnd41 blood
22 chr10:22825200-22840000 Strong transcription Fetal Stomach stomach
23 chr10:22825400-22836800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr10:22825400-22838000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr10:22825400-22838000 Strong transcription Fetal Intestine Small intestine
26 chr10:22825600-22843800 Weak transcription Stomach Mucosa stomach
27 chr10:22825600-22888000 Weak transcription HMEC breast
28 chr10:22825800-22843600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr10:22826000-22843400 Weak transcription Fetal Brain Female brain
30 chr10:22826200-22843600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr10:22826600-22836800 Strong transcription Aorta Aorta
32 chr10:22826600-22843400 Weak transcription Colonic Mucosa Colon
33 chr10:22827000-22835800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr10:22827000-22842200 Weak transcription Right Atrium heart
35 chr10:22828400-22836800 Strong transcription Brain Inferior Temporal Lobe brain
36 chr10:22828600-22837200 Weak transcription NH-A brain
37 chr10:22828800-22840200 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr10:22828800-22841400 Weak transcription HSMM muscle
39 chr10:22829000-22887400 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr10:22829200-22836200 Weak transcription NHDF-Ad bronchial
41 chr10:22829600-22835400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr10:22829800-22836600 Strong transcription Brain Cingulate Gyrus brain
43 chr10:22830000-22834000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr10:22830200-22835000 Strong transcription Brain Angular Gyrus brain
45 chr10:22830200-22839200 Strong transcription Brain Substantia Nigra brain
46 chr10:22830400-22834400 Genic enhancers Brain Hippocampus Middle brain
47 chr10:22830600-22840400 Weak transcription Fetal Brain Male brain
48 chr10:22830600-22841200 Weak transcription Fetal Lung lung
49 chr10:22830600-22842400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr10:22830600-22853000 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015