Variant report

Variant	rs74123714
Chromosome Location	chr13:110370073-110370074
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs56295116	1.00[AFR][1000 genomes]
rs74123707	1.00[AFR][1000 genomes]
rs74123708	1.00[AFR][1000 genomes]
rs74123709	1.00[AFR][1000 genomes]
rs74123718	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044855	chr13:110301572-110408608	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:110365000-110370200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr13:110365000-110372000	Weak transcription	Fetal Lung	lung
3	chr13:110367400-110372200	Weak transcription	Ovary	ovary
4	chr13:110368400-110371200	Weak transcription	A549	lung
5	chr13:110368400-110372000	Strong transcription	Dnd41	blood
6	chr13:110368600-110371800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr13:110368600-110371800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr13:110368600-110377600	Weak transcription	Primary neutrophils fromperipheralblood	blood
9	chr13:110368800-110372000	Weak transcription	K562	blood
10	chr13:110369000-110372000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
11	chr13:110369000-110372000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr13:110369200-110376800	Weak transcription	Adipose Nuclei	Adipose
13	chr13:110369400-110372400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr13:110370000-110370400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr13:110370000-110372600	Enhancers	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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