Variant report

Variant	rs74127360
Chromosome Location	chr10:27855165-27855166
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs11015875	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv550241	chr10:27569521-28025771	Enhancers ZNF genes & repeats Strong transcription Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
2	nsv1045257	chr10:27572440-27926946	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
3	nsv1053952	chr10:27659365-27915029	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:27853000-27857200	Weak transcription	Primary T cells fromperipheralblood	blood
2	chr10:27853000-27867400	Weak transcription	Aorta	Aorta
3	chr10:27853400-27857000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
4	chr10:27853800-27858400	Weak transcription	Primary B cells from cord blood	blood
5	chr10:27854000-27856600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
6	chr10:27854000-27856800	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr10:27854200-27856600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
8	chr10:27854200-27856800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
9	chr10:27854200-27856800	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr10:27854200-27857000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
11	chr10:27854200-27857200	Weak transcription	Primary T helper cells PMA-I stimulated	--
12	chr10:27854400-27856800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
13	chr10:27854400-27857200	Weak transcription	Primary T helper cells fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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