Variant report

Variant	rs74128185
Chromosome Location	chr10:45557699-45557700
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7924266	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831848	chr10:45490176-45667670	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
2	nsv971917	chr10:45547355-45595482	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv2750897	chr10:45550145-45820136	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:45552000-45559600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:45554400-45558800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr10:45554600-45558800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr10:45555400-45558800	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr10:45555600-45558800	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr10:45557000-45558000	Enhancers	Fetal Brain Female	brain
7	chr10:45557200-45558000	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr10:45557200-45558200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr10:45557200-45559000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr10:45557200-45559600	Enhancers	NHEK	skin
11	chr10:45557200-45560200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr10:45557200-45560800	Enhancers	HMEC	breast
13	chr10:45557400-45557800	Enhancers	Aorta	Aorta
14	chr10:45557400-45557800	Enhancers	Brain Anterior Caudate	brain
15	chr10:45557400-45558000	Enhancers	Placenta	Placenta
16	chr10:45557400-45558200	Enhancers	Cortex derived primary cultured neurospheres	brain
17	chr10:45557600-45557800	Enhancers	HUES64 Cell Line	embryonic stem cell
18	chr10:45557600-45557800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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