Variant report
| Variant | rs74131644 |
|---|---|
| Chromosome Location | chr1:184312437-184312438 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:48)
| rs_ID | r2[population] |
|---|---|
| rs10494579 | 1.00[EUR][1000 genomes] |
| rs10911542 | 1.00[EUR][1000 genomes] |
| rs10911543 | 1.00[EUR][1000 genomes] |
| rs1111087 | 1.00[EUR][1000 genomes] |
| rs12066684 | 1.00[EUR][1000 genomes] |
| rs12072264 | 1.00[EUR][1000 genomes] |
| rs12076686 | 1.00[EUR][1000 genomes] |
| rs12076687 | 1.00[EUR][1000 genomes] |
| rs12095050 | 1.00[EUR][1000 genomes] |
| rs13328702 | 1.00[EUR][1000 genomes] |
| rs13375618 | 1.00[EUR][1000 genomes] |
| rs16822757 | 1.00[EUR][1000 genomes] |
| rs16822764 | 1.00[EUR][1000 genomes] |
| rs16822766 | 1.00[EUR][1000 genomes] |
| rs16822783 | 1.00[EUR][1000 genomes] |
| rs16822793 | 1.00[EUR][1000 genomes] |
| rs16823189 | 1.00[EUR][1000 genomes] |
| rs16823192 | 1.00[EUR][1000 genomes] |
| rs16823216 | 1.00[EUR][1000 genomes] |
| rs1930289 | 1.00[EUR][1000 genomes] |
| rs2224030 | 1.00[EUR][1000 genomes] |
| rs4354502 | 1.00[EUR][1000 genomes] |
| rs4543760 | 1.00[EUR][1000 genomes] |
| rs56797986 | 1.00[EUR][1000 genomes] |
| rs57919593 | 1.00[EUR][1000 genomes] |
| rs58307611 | 1.00[EUR][1000 genomes] |
| rs59737381 | 1.00[EUR][1000 genomes] |
| rs59949779 | 1.00[EUR][1000 genomes] |
| rs59960930 | 1.00[EUR][1000 genomes] |
| rs60807093 | 1.00[EUR][1000 genomes] |
| rs6667688 | 1.00[EUR][1000 genomes] |
| rs6668105 | 1.00[EUR][1000 genomes] |
| rs6669875 | 1.00[EUR][1000 genomes] |
| rs6670740 | 1.00[EUR][1000 genomes] |
| rs6694683 | 1.00[EUR][1000 genomes] |
| rs73046716 | 1.00[EUR][1000 genomes] |
| rs73059524 | 1.00[EUR][1000 genomes] |
| rs73059529 | 1.00[EUR][1000 genomes] |
| rs73059544 | 1.00[EUR][1000 genomes] |
| rs73063511 | 1.00[EUR][1000 genomes] |
| rs73063520 | 1.00[EUR][1000 genomes] |
| rs73063529 | 1.00[EUR][1000 genomes] |
| rs73063555 | 1.00[EUR][1000 genomes] |
| rs74131649 | 1.00[EUR][1000 genomes] |
| rs74131651 | 1.00[EUR][1000 genomes] |
| rs74131665 | 1.00[EUR][1000 genomes] |
| rs74131666 | 1.00[EUR][1000 genomes] |
| rs74131668 | 1.00[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv530079 | chr1:183797938-184639971 | Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 21 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:184311400-184313600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
